dbCAN Logo

Cluster: HRGMv2_0215_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0215_65 HRGMv2_0215_65_20 16546 18552 - GH67
TF HRGMv2_0215_65 HRGMv2_0215_65_21 18636 22556 - HTH_AraC
pfam HRGMv2_0215_65 HRGMv2_0215_65_22 22836 24011 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_0215_65 HRGMv2_0215_65_23 24024 25427 + 2.A.2.3.2
CAZyme HRGMv2_0215_65 HRGMv2_0215_65_24 25459 26583 + GH10
CAZyme HRGMv2_0215_65 HRGMv2_0215_65_25 26645 27601 + GH43_1
pfam HRGMv2_0215_65 HRGMv2_0215_65_26 27847 29247 + DUF5687
TC HRGMv2_0215_65 HRGMv2_0215_65_27 29412 30119 + 3.A.1.124.5
Gene ID: HRGMv2_0215_65_20
Type: CAZyme
Location: 16546 - 18552 (-)
Gene ID: HRGMv2_0215_65_21
Type: TF
Location: 18636 - 22556 (-)
Gene ID: HRGMv2_0215_65_22
Type: pfam
Location: 22836 - 24011 (+)
Gene ID: HRGMv2_0215_65_23
Type: TC
Location: 24024 - 25427 (+)
Gene ID: HRGMv2_0215_65_24
Type: CAZyme
Location: 25459 - 26583 (+)
Gene ID: HRGMv2_0215_65_25
Type: CAZyme
Location: 26645 - 27601 (+)
Gene ID: HRGMv2_0215_65_26
Type: pfam
Location: 27847 - 29247 (+)
Gene ID: HRGMv2_0215_65_27
Type: TC
Location: 29412 - 30119 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List