Cluster: HRGMv2_0215_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0215
- CGC Family ID: CGCFAM_00241
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_47 | HRGMv2_0215_47_74 | 80376 | 81719 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_0215_47 | HRGMv2_0215_47_75 | 81838 | 83010 | - | GH130_1 |
| CAZyme | HRGMv2_0215_47 | HRGMv2_0215_47_76 | 83071 | 84231 | - | GH26 |
| CAZyme | HRGMv2_0215_47 | HRGMv2_0215_47_77 | 84236 | 85564 | - | CE7 |
Gene ID: HRGMv2_0215_47_74
Type: TC
Location: 80376 - 81719 (-)
Type: TC
Location: 80376 - 81719 (-)
Gene ID: HRGMv2_0215_47_75
Type: CAZyme
Location: 81838 - 83010 (-)
Type: CAZyme
Location: 81838 - 83010 (-)
Gene ID: HRGMv2_0215_47_76
Type: CAZyme
Location: 83071 - 84231 (-)
Type: CAZyme
Location: 83071 - 84231 (-)
Gene ID: HRGMv2_0215_47_77
Type: CAZyme
Location: 84236 - 85564 (-)
Type: CAZyme
Location: 84236 - 85564 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.