Cluster: HRGMv2_0215_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0215
- CGC Family ID: CGCFAM_00033
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_35 | HRGMv2_0215_35_29 | 28924 | 29883 | - | GT2 |
| TC | HRGMv2_0215_35 | HRGMv2_0215_35_30 | 29949 | 31394 | - | 2.A.66.2.23 |
| CAZyme | HRGMv2_0215_35 | HRGMv2_0215_35_31 | 31429 | 32205 | - | GT2 |
| CAZyme | HRGMv2_0215_35 | HRGMv2_0215_35_32 | 32202 | 33476 | - | GT4 |
Gene ID: HRGMv2_0215_35_29
Type: CAZyme
Location: 28924 - 29883 (-)
Type: CAZyme
Location: 28924 - 29883 (-)
Gene ID: HRGMv2_0215_35_30
Type: TC
Location: 29949 - 31394 (-)
Type: TC
Location: 29949 - 31394 (-)
Gene ID: HRGMv2_0215_35_31
Type: CAZyme
Location: 31429 - 32205 (-)
Type: CAZyme
Location: 31429 - 32205 (-)
Gene ID: HRGMv2_0215_35_32
Type: CAZyme
Location: 32202 - 33476 (-)
Type: CAZyme
Location: 32202 - 33476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.