Cluster: HRGMv2_0215_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_27 | HRGMv2_0215_27_33 | 45003 | 45689 | - | GH25 |
| NULL(UNKNOWN) | HRGMv2_0215_27 | HRGMv2_0215_27_34 | 45757 | 46452 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0215_27 | HRGMv2_0215_27_35 | 46501 | 47811 | - | 2.A.35.1.5 |
Gene ID: HRGMv2_0215_27_33
Type: CAZyme
Location: 45003 - 45689 (-)
Type: CAZyme
Location: 45003 - 45689 (-)
Gene ID: HRGMv2_0215_27_34
Type:
Location: 45757 - 46452 (-)
Type:
Location: 45757 - 46452 (-)
Gene ID: HRGMv2_0215_27_35
Type: TC
Location: 46501 - 47811 (-)
Type: TC
Location: 46501 - 47811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.