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Cluster: HRGMv2_0215_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0215_19 HRGMv2_0215_19_8 8309 9556 - 3.A.1.122.2
TC HRGMv2_0215_19 HRGMv2_0215_19_9 9573 10832 - 3.A.1.122.2
TC HRGMv2_0215_19 HRGMv2_0215_19_10 10848 11564 - 3.A.1.122.14
TF HRGMv2_0215_19 HRGMv2_0215_19_11 11727 12098 - GntR
NULL(UNKNOWN) HRGMv2_0215_19 HRGMv2_0215_19_12 12118 12966 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0215_19 HRGMv2_0215_19_13 12979 13803 - 3.A.1.132.6
TC HRGMv2_0215_19 HRGMv2_0215_19_14 14052 14708 - 1.C.113.1.3
CAZyme HRGMv2_0215_19 HRGMv2_0215_19_15 15000 17195 + GH36
Gene ID: HRGMv2_0215_19_8
Type: TC
Location: 8309 - 9556 (-)
Gene ID: HRGMv2_0215_19_9
Type: TC
Location: 9573 - 10832 (-)
Gene ID: HRGMv2_0215_19_10
Type: TC
Location: 10848 - 11564 (-)
Gene ID: HRGMv2_0215_19_11
Type: TF
Location: 11727 - 12098 (-)
Gene ID: HRGMv2_0215_19_12
Type:
Location: 12118 - 12966 (-)
Gene ID: HRGMv2_0215_19_13
Type: TC
Location: 12979 - 13803 (-)
Gene ID: HRGMv2_0215_19_14
Type: TC
Location: 14052 - 14708 (-)
Gene ID: HRGMv2_0215_19_15
Type: CAZyme
Location: 15000 - 17195 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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