Cluster: HRGMv2_0215_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_18 | HRGMv2_0215_18_10 | 7228 | 8580 | + | 3.A.5.1.1 |
| pfam | HRGMv2_0215_18 | HRGMv2_0215_18_11 | 8645 | 9523 | + | THF_DHG_CYH | THF_DHG_CYH_C |
| CAZyme | HRGMv2_0215_18 | HRGMv2_0215_18_12 | 9701 | 12382 | + | GH51_2 |
Gene ID: HRGMv2_0215_18_10
Type: TC
Location: 7228 - 8580 (+)
Type: TC
Location: 7228 - 8580 (+)
Gene ID: HRGMv2_0215_18_11
Type: pfam
Location: 8645 - 9523 (+)
Type: pfam
Location: 8645 - 9523 (+)
Gene ID: HRGMv2_0215_18_12
Type: CAZyme
Location: 9701 - 12382 (+)
Type: CAZyme
Location: 9701 - 12382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.