Cluster: HRGMv2_0215_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0215
- CGC Family ID: CGCFAM_03209
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_1 | HRGMv2_0215_1_11 | 13352 | 14332 | - | GT2 |
| CAZyme | HRGMv2_0215_1 | HRGMv2_0215_1_12 | 14287 | 15351 | - | GT2 |
| pfam | HRGMv2_0215_1 | HRGMv2_0215_1_13 | 15393 | 17417 | - | PorZ_N_b_propeller |
| CAZyme | HRGMv2_0215_1 | HRGMv2_0215_1_14 | 17414 | 18343 | - | GT2 |
| sulfatase | HRGMv2_0215_1 | HRGMv2_0215_1_15 | 18336 | 18953 | - | S1_7 |
| TC | HRGMv2_0215_1 | HRGMv2_0215_1_16 | 18959 | 19912 | - | 2.A.115.1.2 |
Gene ID: HRGMv2_0215_1_11
Type: CAZyme
Location: 13352 - 14332 (-)
Type: CAZyme
Location: 13352 - 14332 (-)
Gene ID: HRGMv2_0215_1_12
Type: CAZyme
Location: 14287 - 15351 (-)
Type: CAZyme
Location: 14287 - 15351 (-)
Gene ID: HRGMv2_0215_1_13
Type: pfam
Location: 15393 - 17417 (-)
Type: pfam
Location: 15393 - 17417 (-)
Gene ID: HRGMv2_0215_1_14
Type: CAZyme
Location: 17414 - 18343 (-)
Type: CAZyme
Location: 17414 - 18343 (-)
Gene ID: HRGMv2_0215_1_15
Type: sulfatase
Location: 18336 - 18953 (-)
Type: sulfatase
Location: 18336 - 18953 (-)
Gene ID: HRGMv2_0215_1_16
Type: TC
Location: 18959 - 19912 (-)
Type: TC
Location: 18959 - 19912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.