Cluster: HRGMv2_0207_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- CGC Family ID: CGCFAM_00234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0207_3 | HRGMv2_0207_3_31 | 33383 | 34723 | - | 2.A.66.1.28 |
| pfam | HRGMv2_0207_3 | HRGMv2_0207_3_32 | 34803 | 37433 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| NULL(UNKNOWN) | HRGMv2_0207_3 | HRGMv2_0207_3_33 | 37470 | 38336 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0207_3 | HRGMv2_0207_3_34 | 38333 | 39337 | - | GT2 |
Gene ID: HRGMv2_0207_3_31
Type: TC
Location: 33383 - 34723 (-)
Type: TC
Location: 33383 - 34723 (-)
Gene ID: HRGMv2_0207_3_32
Type: pfam
Location: 34803 - 37433 (-)
Type: pfam
Location: 34803 - 37433 (-)
Gene ID: HRGMv2_0207_3_33
Type:
Location: 37470 - 38336 (-)
Type:
Location: 37470 - 38336 (-)
Gene ID: HRGMv2_0207_3_34
Type: CAZyme
Location: 38333 - 39337 (-)
Type: CAZyme
Location: 38333 - 39337 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.