Cluster: HRGMv2_0207_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0207_2 | HRGMv2_0207_2_90 | 106514 | 107467 | + | 3.A.5.1.1 |
| pfam | HRGMv2_0207_2 | HRGMv2_0207_2_91 | 107497 | 108762 | + | UPF0004 | Radical_SAM | TRAM_2 |
| NULL(UNKNOWN) | HRGMv2_0207_2 | HRGMv2_0207_2_92 | 108759 | 109913 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0207_2 | HRGMv2_0207_2_93 | 109922 | 112135 | + | GH92 |
Gene ID: HRGMv2_0207_2_90
Type: TC
Location: 106514 - 107467 (+)
Type: TC
Location: 106514 - 107467 (+)
Gene ID: HRGMv2_0207_2_91
Type: pfam
Location: 107497 - 108762 (+)
Type: pfam
Location: 107497 - 108762 (+)
Gene ID: HRGMv2_0207_2_92
Type:
Location: 108759 - 109913 (+)
Type:
Location: 108759 - 109913 (+)
Gene ID: HRGMv2_0207_2_93
Type: CAZyme
Location: 109922 - 112135 (+)
Type: CAZyme
Location: 109922 - 112135 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.