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Cluster: HRGMv2_0207_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0207_2 HRGMv2_0207_2_49 48964 51567 - 3.A.9.1.2
CAZyme HRGMv2_0207_2 HRGMv2_0207_2_50 51756 54047 - GH20
STP HRGMv2_0207_2 HRGMv2_0207_2_51 54044 55099 - Aminotran_1_2
NULL(UNKNOWN) HRGMv2_0207_2 HRGMv2_0207_2_52 55372 56076 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0207_2 HRGMv2_0207_2_53 56100 58040 + 3.D.10.1.5
TC HRGMv2_0207_2 HRGMv2_0207_2_54 58071 58826 + 3.D.10.1.5
pfam HRGMv2_0207_2 HRGMv2_0207_2_55 59440 60366 - YitT_membrane | DUF2179
CAZyme HRGMv2_0207_2 HRGMv2_0207_2_56 60670 62715 + GH133
CAZyme HRGMv2_0207_2 HRGMv2_0207_2_57 62738 63985 + GT4
CAZyme HRGMv2_0207_2 HRGMv2_0207_2_58 64020 65318 + GH57
pfam HRGMv2_0207_2 HRGMv2_0207_2_59 65397 66416 + Aminotran_4
CAZyme HRGMv2_0207_2 HRGMv2_0207_2_60 66544 68790 + GH92
Gene ID: HRGMv2_0207_2_49
Type: TC
Location: 48964 - 51567 (-)
Gene ID: HRGMv2_0207_2_50
Type: CAZyme
Location: 51756 - 54047 (-)
Gene ID: HRGMv2_0207_2_51
Type: STP
Location: 54044 - 55099 (-)
Gene ID: HRGMv2_0207_2_52
Type:
Location: 55372 - 56076 (+)
Gene ID: HRGMv2_0207_2_53
Type: TC
Location: 56100 - 58040 (+)
Gene ID: HRGMv2_0207_2_54
Type: TC
Location: 58071 - 58826 (+)
Gene ID: HRGMv2_0207_2_55
Type: pfam
Location: 59440 - 60366 (-)
Gene ID: HRGMv2_0207_2_56
Type: CAZyme
Location: 60670 - 62715 (+)
Gene ID: HRGMv2_0207_2_57
Type: CAZyme
Location: 62738 - 63985 (+)
Gene ID: HRGMv2_0207_2_58
Type: CAZyme
Location: 64020 - 65318 (+)
Gene ID: HRGMv2_0207_2_59
Type: pfam
Location: 65397 - 66416 (+)
Gene ID: HRGMv2_0207_2_60
Type: CAZyme
Location: 66544 - 68790 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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