Cluster: HRGMv2_0207_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- CGC Family ID: CGCFAM_04806
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0207_40 | HRGMv2_0207_40_5 | 6737 | 9088 | - | 8.A.3.3.3 |
| pfam | HRGMv2_0207_40 | HRGMv2_0207_40_6 | 9112 | 9936 | - | Poly_export | SLBB_2 |
| TC | HRGMv2_0207_40 | HRGMv2_0207_40_7 | 9988 | 10713 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_0207_40 | HRGMv2_0207_40_8 | 10776 | 11903 | - | GT4 |
Gene ID: HRGMv2_0207_40_5
Type: TC
Location: 6737 - 9088 (-)
Type: TC
Location: 6737 - 9088 (-)
Gene ID: HRGMv2_0207_40_6
Type: pfam
Location: 9112 - 9936 (-)
Type: pfam
Location: 9112 - 9936 (-)
Gene ID: HRGMv2_0207_40_7
Type: TC
Location: 9988 - 10713 (-)
Type: TC
Location: 9988 - 10713 (-)
Gene ID: HRGMv2_0207_40_8
Type: CAZyme
Location: 10776 - 11903 (-)
Type: CAZyme
Location: 10776 - 11903 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.