Cluster: HRGMv2_0207_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0207
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0207_23 | HRGMv2_0207_23_15 | 18579 | 19814 | + | GT4 |
| pfam | HRGMv2_0207_23 | HRGMv2_0207_23_16 | 19881 | 20438 | + | Hexapep | Hexapep_2 |
| TC | HRGMv2_0207_23 | HRGMv2_0207_23_17 | 20445 | 21500 | + | 9.B.18.2.1 |
| pfam | HRGMv2_0207_23 | HRGMv2_0207_23_18 | 21507 | 22709 | + | Epimerase | Polysacc_synt_C |
| pfam | HRGMv2_0207_23 | HRGMv2_0207_23_19 | 22716 | 23903 | + | Epimerase_2 |
| CAZyme | HRGMv2_0207_23 | HRGMv2_0207_23_20 | 23956 | 25185 | + | GT4 |
| TC | HRGMv2_0207_23 | HRGMv2_0207_23_21 | 25632 | 26252 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_0207_23_15
Type: CAZyme
Location: 18579 - 19814 (+)
Type: CAZyme
Location: 18579 - 19814 (+)
Gene ID: HRGMv2_0207_23_16
Type: pfam
Location: 19881 - 20438 (+)
Type: pfam
Location: 19881 - 20438 (+)
Gene ID: HRGMv2_0207_23_17
Type: TC
Location: 20445 - 21500 (+)
Type: TC
Location: 20445 - 21500 (+)
Gene ID: HRGMv2_0207_23_18
Type: pfam
Location: 21507 - 22709 (+)
Type: pfam
Location: 21507 - 22709 (+)
Gene ID: HRGMv2_0207_23_19
Type: pfam
Location: 22716 - 23903 (+)
Type: pfam
Location: 22716 - 23903 (+)
Gene ID: HRGMv2_0207_23_20
Type: CAZyme
Location: 23956 - 25185 (+)
Type: CAZyme
Location: 23956 - 25185 (+)
Gene ID: HRGMv2_0207_23_21
Type: TC
Location: 25632 - 26252 (+)
Type: TC
Location: 25632 - 26252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.