Cluster: HRGMv2_0207_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0207_21 | HRGMv2_0207_21_18 | 22241 | 23137 | + | GT23 |
| TF | HRGMv2_0207_21 | HRGMv2_0207_21_19 | 23584 | 23766 | - | PspC |
| pfam | HRGMv2_0207_21 | HRGMv2_0207_21_20 | 24277 | 25938 | + | AMP-binding | AMP-binding_C_3 |
| TC | HRGMv2_0207_21 | HRGMv2_0207_21_21 | 26228 | 28144 | + | 1.A.33.1.4 |
Gene ID: HRGMv2_0207_21_18
Type: CAZyme
Location: 22241 - 23137 (+)
Type: CAZyme
Location: 22241 - 23137 (+)
Gene ID: HRGMv2_0207_21_19
Type: TF
Location: 23584 - 23766 (-)
Type: TF
Location: 23584 - 23766 (-)
Gene ID: HRGMv2_0207_21_20
Type: pfam
Location: 24277 - 25938 (+)
Type: pfam
Location: 24277 - 25938 (+)
Gene ID: HRGMv2_0207_21_21
Type: TC
Location: 26228 - 28144 (+)
Type: TC
Location: 26228 - 28144 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.