Cluster: HRGMv2_0207_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0207_1 | HRGMv2_0207_1_112 | 130737 | 132665 | + | GH29 |
| TC | HRGMv2_0207_1 | HRGMv2_0207_1_113 | 132693 | 133991 | + | 2.A.40.7.6 |
| pfam | HRGMv2_0207_1 | HRGMv2_0207_1_114 | 134334 | 135662 | - | SUFBD_core | SufBD_N |
| TC | HRGMv2_0207_1 | HRGMv2_0207_1_115 | 135659 | 136420 | - | 3.A.1.4.10 |
Gene ID: HRGMv2_0207_1_112
Type: CAZyme
Location: 130737 - 132665 (+)
Type: CAZyme
Location: 130737 - 132665 (+)
Gene ID: HRGMv2_0207_1_113
Type: TC
Location: 132693 - 133991 (+)
Type: TC
Location: 132693 - 133991 (+)
Gene ID: HRGMv2_0207_1_114
Type: pfam
Location: 134334 - 135662 (-)
Type: pfam
Location: 134334 - 135662 (-)
Gene ID: HRGMv2_0207_1_115
Type: TC
Location: 135659 - 136420 (-)
Type: TC
Location: 135659 - 136420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.