Cluster: HRGMv2_0207_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0207_21 | HRGMv2_0207_21_3 | 2684 | 2932 | - | 3.D.1.6.3 |
| pfam | HRGMv2_0207_21 | HRGMv2_0207_21_4 | 3093 | 3671 | + | Formyl_trans_N |
| pfam | HRGMv2_0207_21 | HRGMv2_0207_21_5 | 3655 | 4773 | - | Porin_O_P |
| CAZyme | HRGMv2_0207_21 | HRGMv2_0207_21_6 | 4839 | 6392 | - | GH33 |
Gene ID: HRGMv2_0207_21_3
Type: TC
Location: 2684 - 2932 (-)
Type: TC
Location: 2684 - 2932 (-)
Gene ID: HRGMv2_0207_21_4
Type: pfam
Location: 3093 - 3671 (+)
Type: pfam
Location: 3093 - 3671 (+)
Gene ID: HRGMv2_0207_21_5
Type: pfam
Location: 3655 - 4773 (-)
Type: pfam
Location: 3655 - 4773 (-)
Gene ID: HRGMv2_0207_21_6
Type: CAZyme
Location: 4839 - 6392 (-)
Type: CAZyme
Location: 4839 - 6392 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.