Cluster: HRGMv2_0207_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0207_16 | HRGMv2_0207_16_32 | 44739 | 47705 | - | GH3 |
| TC | HRGMv2_0207_16 | HRGMv2_0207_16_33 | 47825 | 49492 | + | 4.C.1.1.4 |
| CAZyme | HRGMv2_0207_16 | HRGMv2_0207_16_34 | 49636 | 52206 | + | GT35 |
Gene ID: HRGMv2_0207_16_32
Type: CAZyme
Location: 44739 - 47705 (-)
Type: CAZyme
Location: 44739 - 47705 (-)
Gene ID: HRGMv2_0207_16_33
Type: TC
Location: 47825 - 49492 (+)
Type: TC
Location: 47825 - 49492 (+)
Gene ID: HRGMv2_0207_16_34
Type: CAZyme
Location: 49636 - 52206 (+)
Type: CAZyme
Location: 49636 - 52206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.