Cluster: HRGMv2_0207_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0207_14 | HRGMv2_0207_14_12 | 15629 | 18607 | - | 2.A.6.4.3 |
| STP | HRGMv2_0207_14 | HRGMv2_0207_14_13 | 18863 | 20200 | - | ATPase_2 |
| peptidase | HRGMv2_0207_14 | HRGMv2_0207_14_14 | 20984 | 21838 | + | G05.UPW |
| CAZyme | HRGMv2_0207_14 | HRGMv2_0207_14_15 | 21828 | 23621 | + | GH29 |
Gene ID: HRGMv2_0207_14_12
Type: TC
Location: 15629 - 18607 (-)
Type: TC
Location: 15629 - 18607 (-)
Gene ID: HRGMv2_0207_14_13
Type: STP
Location: 18863 - 20200 (-)
Type: STP
Location: 18863 - 20200 (-)
Gene ID: HRGMv2_0207_14_14
Type: peptidase
Location: 20984 - 21838 (+)
Type: peptidase
Location: 20984 - 21838 (+)
Gene ID: HRGMv2_0207_14_15
Type: CAZyme
Location: 21828 - 23621 (+)
Type: CAZyme
Location: 21828 - 23621 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.