Cluster: HRGMv2_0207_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0207_11 | HRGMv2_0207_11_6 | 6099 | 8327 | - | GH92 |
| pfam | HRGMv2_0207_11 | HRGMv2_0207_11_7 | 8350 | 8796 | - | dUTPase | DCD |
| pfam | HRGMv2_0207_11 | HRGMv2_0207_11_8 | 8806 | 9894 | - | LpxK |
| TC | HRGMv2_0207_11 | HRGMv2_0207_11_9 | 9913 | 11751 | - | 8.A.21.2.4 |
Gene ID: HRGMv2_0207_11_6
Type: CAZyme
Location: 6099 - 8327 (-)
Type: CAZyme
Location: 6099 - 8327 (-)
Gene ID: HRGMv2_0207_11_7
Type: pfam
Location: 8350 - 8796 (-)
Type: pfam
Location: 8350 - 8796 (-)
Gene ID: HRGMv2_0207_11_8
Type: pfam
Location: 8806 - 9894 (-)
Type: pfam
Location: 8806 - 9894 (-)
Gene ID: HRGMv2_0207_11_9
Type: TC
Location: 9913 - 11751 (-)
Type: TC
Location: 9913 - 11751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.