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Cluster: HRGMv2_0207_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0207_7 HRGMv2_0207_7_9 16243 18630 + GT51
TC HRGMv2_0207_7 HRGMv2_0207_7_10 18694 21423 + 4.A.2.1.17
TC HRGMv2_0207_7 HRGMv2_0207_7_11 21723 25076 - 1.B.14.6.3
pfam HRGMv2_0207_7 HRGMv2_0207_7_12 25221 26075 + Pterin_bind
pfam HRGMv2_0207_7 HRGMv2_0207_7_13 26087 26905 + DAC | CdaA_N
TC HRGMv2_0207_7 HRGMv2_0207_7_14 26920 29247 + 1.B.14.6.14
pfam HRGMv2_0207_7 HRGMv2_0207_7_15 29230 29700 - Radical_SAM | Fer4_12
TC HRGMv2_0207_7 HRGMv2_0207_7_16 29706 31379 - 2.A.81.1.2
pfam HRGMv2_0207_7 HRGMv2_0207_7_17 31398 33797 - ATP-cone | NRDD
pfam HRGMv2_0207_7 HRGMv2_0207_7_18 34309 35502 - BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_0207_7 HRGMv2_0207_7_19 35528 36640 - GH18
TC HRGMv2_0207_7 HRGMv2_0207_7_20 36662 38317 - 8.A.46.2.1
TC HRGMv2_0207_7 HRGMv2_0207_7_21 38343 41396 - 1.B.14.6.13
TC HRGMv2_0207_7 HRGMv2_0207_7_22 42526 45192 + 3.A.3.2.14
Gene ID: HRGMv2_0207_7_9
Type: CAZyme
Location: 16243 - 18630 (+)
Gene ID: HRGMv2_0207_7_10
Type: TC
Location: 18694 - 21423 (+)
Gene ID: HRGMv2_0207_7_11
Type: TC
Location: 21723 - 25076 (-)
Gene ID: HRGMv2_0207_7_12
Type: pfam
Location: 25221 - 26075 (+)
Gene ID: HRGMv2_0207_7_13
Type: pfam
Location: 26087 - 26905 (+)
Gene ID: HRGMv2_0207_7_14
Type: TC
Location: 26920 - 29247 (+)
Gene ID: HRGMv2_0207_7_15
Type: pfam
Location: 29230 - 29700 (-)
Gene ID: HRGMv2_0207_7_16
Type: TC
Location: 29706 - 31379 (-)
Gene ID: HRGMv2_0207_7_17
Type: pfam
Location: 31398 - 33797 (-)
Gene ID: HRGMv2_0207_7_18
Type: pfam
Location: 34309 - 35502 (-)
Gene ID: HRGMv2_0207_7_19
Type: CAZyme
Location: 35528 - 36640 (-)
Gene ID: HRGMv2_0207_7_20
Type: TC
Location: 36662 - 38317 (-)
Gene ID: HRGMv2_0207_7_21
Type: TC
Location: 38343 - 41396 (-)
Gene ID: HRGMv2_0207_7_22
Type: TC
Location: 42526 - 45192 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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