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Cluster: HRGMv2_0194_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0194_41 HRGMv2_0194_41_4 3093 3623 + 2.A.51.1.6
TC HRGMv2_0194_41 HRGMv2_0194_41_5 3636 4238 + 2.A.51.1.6
pfam HRGMv2_0194_41 HRGMv2_0194_41_6 4235 5611 + UPF0004 | Radical_SAM
CAZyme HRGMv2_0194_41 HRGMv2_0194_41_7 5620 6639 + GT27
TC HRGMv2_0194_41 HRGMv2_0194_41_8 6677 7048 - 2.A.7.34.3
pfam HRGMv2_0194_41 HRGMv2_0194_41_9 7182 7667 + GSHPx
pfam HRGMv2_0194_41 HRGMv2_0194_41_10 7682 8137 + NfeD
TC HRGMv2_0194_41 HRGMv2_0194_41_11 8159 9175 + 8.A.21.2.1
Gene ID: HRGMv2_0194_41_4
Type: TC
Location: 3093 - 3623 (+)
Gene ID: HRGMv2_0194_41_5
Type: TC
Location: 3636 - 4238 (+)
Gene ID: HRGMv2_0194_41_6
Type: pfam
Location: 4235 - 5611 (+)
Gene ID: HRGMv2_0194_41_7
Type: CAZyme
Location: 5620 - 6639 (+)
Gene ID: HRGMv2_0194_41_8
Type: TC
Location: 6677 - 7048 (-)
Gene ID: HRGMv2_0194_41_9
Type: pfam
Location: 7182 - 7667 (+)
Gene ID: HRGMv2_0194_41_10
Type: pfam
Location: 7682 - 8137 (+)
Gene ID: HRGMv2_0194_41_11
Type: TC
Location: 8159 - 9175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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