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Cluster: HRGMv2_0194_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0194_26 HRGMv2_0194_26_13 16915 19884 - 1.B.42.1.8
pfam HRGMv2_0194_26 HRGMv2_0194_26_14 20150 20884 - SIMPL
STP HRGMv2_0194_26 HRGMv2_0194_26_15 20941 21888 - Pyr_redox_2
CAZyme HRGMv2_0194_26 HRGMv2_0194_26_16 22412 23728 + GH3
STP HRGMv2_0194_26 HRGMv2_0194_26_17 23770 24795 + Aminotran_1_2
pfam HRGMv2_0194_26 HRGMv2_0194_26_18 24908 25342 + RseC_MucC
TC HRGMv2_0194_26 HRGMv2_0194_26_19 25359 26276 + 3.D.6.1.2
TC HRGMv2_0194_26 HRGMv2_0194_26_20 26286 27638 + 3.D.6.1.2
TC HRGMv2_0194_26 HRGMv2_0194_26_21 27691 28680 + 3.D.6.1.2
TC HRGMv2_0194_26 HRGMv2_0194_26_22 28677 29825 + 3.D.6.1.3
TC HRGMv2_0194_26 HRGMv2_0194_26_23 29835 30425 + 3.D.6.1.2
TC HRGMv2_0194_26 HRGMv2_0194_26_24 30490 31071 + 3.D.6.1.2
Gene ID: HRGMv2_0194_26_13
Type: TC
Location: 16915 - 19884 (-)
Gene ID: HRGMv2_0194_26_14
Type: pfam
Location: 20150 - 20884 (-)
Gene ID: HRGMv2_0194_26_15
Type: STP
Location: 20941 - 21888 (-)
Gene ID: HRGMv2_0194_26_16
Type: CAZyme
Location: 22412 - 23728 (+)
Gene ID: HRGMv2_0194_26_17
Type: STP
Location: 23770 - 24795 (+)
Gene ID: HRGMv2_0194_26_18
Type: pfam
Location: 24908 - 25342 (+)
Gene ID: HRGMv2_0194_26_19
Type: TC
Location: 25359 - 26276 (+)
Gene ID: HRGMv2_0194_26_20
Type: TC
Location: 26286 - 27638 (+)
Gene ID: HRGMv2_0194_26_21
Type: TC
Location: 27691 - 28680 (+)
Gene ID: HRGMv2_0194_26_22
Type: TC
Location: 28677 - 29825 (+)
Gene ID: HRGMv2_0194_26_23
Type: TC
Location: 29835 - 30425 (+)
Gene ID: HRGMv2_0194_26_24
Type: TC
Location: 30490 - 31071 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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