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Cluster: HRGMv2_0194_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0194_4 HRGMv2_0194_4_38 50694 51737 + GT2
pfam HRGMv2_0194_4 HRGMv2_0194_4_39 51734 52804 + EpsG
CAZyme HRGMv2_0194_4 HRGMv2_0194_4_40 52798 53979 + GT4
CAZyme HRGMv2_0194_4 HRGMv2_0194_4_41 54006 54854 + GT2
CAZyme HRGMv2_0194_4 HRGMv2_0194_4_42 54851 55849 + GT2
TC HRGMv2_0194_4 HRGMv2_0194_4_43 55856 56464 + 9.B.18.1.2
Gene ID: HRGMv2_0194_4_38
Type: CAZyme
Location: 50694 - 51737 (+)
Gene ID: HRGMv2_0194_4_39
Type: pfam
Location: 51734 - 52804 (+)
Gene ID: HRGMv2_0194_4_40
Type: CAZyme
Location: 52798 - 53979 (+)
Gene ID: HRGMv2_0194_4_41
Type: CAZyme
Location: 54006 - 54854 (+)
Gene ID: HRGMv2_0194_4_42
Type: CAZyme
Location: 54851 - 55849 (+)
Gene ID: HRGMv2_0194_4_43
Type: TC
Location: 55856 - 56464 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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