Cluster: HRGMv2_0194_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0194
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0194_55 | HRGMv2_0194_55_7 | 7222 | 8775 | - | 3.B.1.1.2 |
| STP | HRGMv2_0194_55 | HRGMv2_0194_55_8 | 8811 | 9227 | - | Glyoxalase |
| peptidase | HRGMv2_0194_55 | HRGMv2_0194_55_9 | 9401 | 10756 | - | M38.UNW |
| CAZyme | HRGMv2_0194_55 | HRGMv2_0194_55_10 | 10758 | 11513 | - | GT2 |
Gene ID: HRGMv2_0194_55_7
Type: TC
Location: 7222 - 8775 (-)
Type: TC
Location: 7222 - 8775 (-)
Gene ID: HRGMv2_0194_55_8
Type: STP
Location: 8811 - 9227 (-)
Type: STP
Location: 8811 - 9227 (-)
Gene ID: HRGMv2_0194_55_9
Type: peptidase
Location: 9401 - 10756 (-)
Type: peptidase
Location: 9401 - 10756 (-)
Gene ID: HRGMv2_0194_55_10
Type: CAZyme
Location: 10758 - 11513 (-)
Type: CAZyme
Location: 10758 - 11513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp900539765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.