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Cluster: HRGMv2_0193_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0193_5 HRGMv2_0193_5_8 6786 7727 - GH73
pfam HRGMv2_0193_5 HRGMv2_0193_5_9 8203 9999 + S1 | S1 | S1 | S1 | S1 | S1 | S1_RRP5
TC HRGMv2_0193_5 HRGMv2_0193_5_10 10283 10840 + 8.A.58.2.9
pfam HRGMv2_0193_5 HRGMv2_0193_5_11 10992 12425 + Trigger_N
TC HRGMv2_0193_5 HRGMv2_0193_5_12 12743 14458 + 9.B.174.1.1
TC HRGMv2_0193_5 HRGMv2_0193_5_13 14521 16200 + 2.A.81.1.2
Gene ID: HRGMv2_0193_5_8
Type: CAZyme
Location: 6786 - 7727 (-)
Gene ID: HRGMv2_0193_5_9
Type: pfam
Location: 8203 - 9999 (+)
Gene ID: HRGMv2_0193_5_10
Type: TC
Location: 10283 - 10840 (+)
Gene ID: HRGMv2_0193_5_11
Type: pfam
Location: 10992 - 12425 (+)
Gene ID: HRGMv2_0193_5_12
Type: TC
Location: 12743 - 14458 (+)
Gene ID: HRGMv2_0193_5_13
Type: TC
Location: 14521 - 16200 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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