dbCAN Logo

Cluster: HRGMv2_0191_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0191_2 HRGMv2_0191_2_6 5459 7327 + 2.A.9.3.2
pfam HRGMv2_0191_2 HRGMv2_0191_2_7 7358 8023 + Ala_racemase_N
TF HRGMv2_0191_2 HRGMv2_0191_2_8 8237 9646 - 0040266
TC HRGMv2_0191_2 HRGMv2_0191_2_9 10042 10722 - 9.B.186.1.3
pfam HRGMv2_0191_2 HRGMv2_0191_2_10 10842 11840 - Gp_dh_N | Gp_dh_C
pfam HRGMv2_0191_2 HRGMv2_0191_2_11 11975 12835 + SurE
CAZyme HRGMv2_0191_2 HRGMv2_0191_2_12 12927 14087 + GT19
NULL(UNKNOWN) HRGMv2_0191_2 HRGMv2_0191_2_13 14118 15224 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0191_2 HRGMv2_0191_2_14 15312 16229 - GH25
TC HRGMv2_0191_2 HRGMv2_0191_2_15 16320 17993 + 2.A.81.1.2
Gene ID: HRGMv2_0191_2_6
Type: TC
Location: 5459 - 7327 (+)
Gene ID: HRGMv2_0191_2_7
Type: pfam
Location: 7358 - 8023 (+)
Gene ID: HRGMv2_0191_2_8
Type: TF
Location: 8237 - 9646 (-)
Gene ID: HRGMv2_0191_2_9
Type: TC
Location: 10042 - 10722 (-)
Gene ID: HRGMv2_0191_2_10
Type: pfam
Location: 10842 - 11840 (-)
Gene ID: HRGMv2_0191_2_11
Type: pfam
Location: 11975 - 12835 (+)
Gene ID: HRGMv2_0191_2_12
Type: CAZyme
Location: 12927 - 14087 (+)
Gene ID: HRGMv2_0191_2_13
Type:
Location: 14118 - 15224 (+)
Gene ID: HRGMv2_0191_2_14
Type: CAZyme
Location: 15312 - 16229 (-)
Gene ID: HRGMv2_0191_2_15
Type: TC
Location: 16320 - 17993 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Cryptobacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List