Cluster: HRGMv2_0191_CGC21
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0191
- CGC Family ID: CGCFAM_07859
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0191_15 | HRGMv2_0191_15_11 | 13153 | 14253 | - | GH105 |
| TC | HRGMv2_0191_15 | HRGMv2_0191_15_12 | 14266 | 15708 | - | 2.A.1.14.2 |
| sulfatase | HRGMv2_0191_15 | HRGMv2_0191_15_13 | 15714 | 16823 | - | S1_27 |
| sulfatase | HRGMv2_0191_15 | HRGMv2_0191_15_14 | 16823 | 17617 | - | S1_2 |
| CAZyme | HRGMv2_0191_15 | HRGMv2_0191_15_15 | 17728 | 19617 | - | PL35 |
| TF | HRGMv2_0191_15 | HRGMv2_0191_15_16 | 19764 | 20831 | + | LacI |
| CAZyme | HRGMv2_0191_15 | HRGMv2_0191_15_17 | 20843 | 22831 | + | PL8_3 |
| TF | HRGMv2_0191_15 | HRGMv2_0191_15_18 | 22831 | 26820 | + | HTH_AraC |
| CAZyme | HRGMv2_0191_15 | HRGMv2_0191_15_19 | 26938 | 28446 | + | PL42 |
| CAZyme | HRGMv2_0191_15 | HRGMv2_0191_15_20 | 28459 | 30459 | + | PL42 |
| pfam | HRGMv2_0191_15 | HRGMv2_0191_15_21 | 30513 | 32099 | + | BACON | BACON | BACON | BACON_2 | BACON_2 | BACON_2 |
| TC | HRGMv2_0191_15 | HRGMv2_0191_15_22 | 32112 | 35294 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0191_15_11
Type: CAZyme
Location: 13153 - 14253 (-)
Type: CAZyme
Location: 13153 - 14253 (-)
Gene ID: HRGMv2_0191_15_12
Type: TC
Location: 14266 - 15708 (-)
Type: TC
Location: 14266 - 15708 (-)
Gene ID: HRGMv2_0191_15_13
Type: sulfatase
Location: 15714 - 16823 (-)
Type: sulfatase
Location: 15714 - 16823 (-)
Gene ID: HRGMv2_0191_15_14
Type: sulfatase
Location: 16823 - 17617 (-)
Type: sulfatase
Location: 16823 - 17617 (-)
Gene ID: HRGMv2_0191_15_15
Type: CAZyme
Location: 17728 - 19617 (-)
Type: CAZyme
Location: 17728 - 19617 (-)
Gene ID: HRGMv2_0191_15_16
Type: TF
Location: 19764 - 20831 (+)
Type: TF
Location: 19764 - 20831 (+)
Gene ID: HRGMv2_0191_15_17
Type: CAZyme
Location: 20843 - 22831 (+)
Type: CAZyme
Location: 20843 - 22831 (+)
Gene ID: HRGMv2_0191_15_18
Type: TF
Location: 22831 - 26820 (+)
Type: TF
Location: 22831 - 26820 (+)
Gene ID: HRGMv2_0191_15_19
Type: CAZyme
Location: 26938 - 28446 (+)
Type: CAZyme
Location: 26938 - 28446 (+)
Gene ID: HRGMv2_0191_15_20
Type: CAZyme
Location: 28459 - 30459 (+)
Type: CAZyme
Location: 28459 - 30459 (+)
Gene ID: HRGMv2_0191_15_21
Type: pfam
Location: 30513 - 32099 (+)
Type: pfam
Location: 30513 - 32099 (+)
Gene ID: HRGMv2_0191_15_22
Type: TC
Location: 32112 - 35294 (+)
Type: TC
Location: 32112 - 35294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.