Cluster: HRGMv2_0191_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0191
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0191_7 | HRGMv2_0191_7_42 | 57606 | 59249 | + | 4.C.1.1.7 |
| pfam | HRGMv2_0191_7 | HRGMv2_0191_7_43 | 59436 | 60989 | + | Mfa_like_1 |
| TF | HRGMv2_0191_7 | HRGMv2_0191_7_44 | 60986 | 64972 | + | HTH_AraC |
| TC | HRGMv2_0191_7 | HRGMv2_0191_7_45 | 65073 | 68330 | + | 1.B.14.6.1 |
| TC | HRGMv2_0191_7 | HRGMv2_0191_7_46 | 68342 | 70102 | + | 8.A.46.1.3 |
| STP | HRGMv2_0191_7 | HRGMv2_0191_7_47 | 70142 | 73444 | + | TPR_2 |
| CAZyme | HRGMv2_0191_7 | HRGMv2_0191_7_48 | 73455 | 75233 | + | GH93 |
Gene ID: HRGMv2_0191_7_42
Type: TC
Location: 57606 - 59249 (+)
Type: TC
Location: 57606 - 59249 (+)
Gene ID: HRGMv2_0191_7_43
Type: pfam
Location: 59436 - 60989 (+)
Type: pfam
Location: 59436 - 60989 (+)
Gene ID: HRGMv2_0191_7_44
Type: TF
Location: 60986 - 64972 (+)
Type: TF
Location: 60986 - 64972 (+)
Gene ID: HRGMv2_0191_7_45
Type: TC
Location: 65073 - 68330 (+)
Type: TC
Location: 65073 - 68330 (+)
Gene ID: HRGMv2_0191_7_46
Type: TC
Location: 68342 - 70102 (+)
Type: TC
Location: 68342 - 70102 (+)
Gene ID: HRGMv2_0191_7_47
Type: STP
Location: 70142 - 73444 (+)
Type: STP
Location: 70142 - 73444 (+)
Gene ID: HRGMv2_0191_7_48
Type: CAZyme
Location: 73455 - 75233 (+)
Type: CAZyme
Location: 73455 - 75233 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.