Cluster: HRGMv2_0186_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0186
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0186_69 | HRGMv2_0186_69_10 | 12022 | 12666 | + | 3.A.1.125.2 |
| NULL(UNKNOWN) | HRGMv2_0186_69 | HRGMv2_0186_69_11 | 12663 | 13865 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0186_69 | HRGMv2_0186_69_12 | 14318 | 14479 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0186_69 | HRGMv2_0186_69_13 | 15298 | 17325 | + | GH133 |
Gene ID: HRGMv2_0186_69_10
Type: TC
Location: 12022 - 12666 (+)
Type: TC
Location: 12022 - 12666 (+)
Gene ID: HRGMv2_0186_69_11
Type:
Location: 12663 - 13865 (+)
Type:
Location: 12663 - 13865 (+)
Gene ID: HRGMv2_0186_69_12
Type:
Location: 14318 - 14479 (+)
Type:
Location: 14318 - 14479 (+)
Gene ID: HRGMv2_0186_69_13
Type: CAZyme
Location: 15298 - 17325 (+)
Type: CAZyme
Location: 15298 - 17325 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0186_69_13 | vegan > omnivore | 1.40320 | 0.02677 |