Cluster: HRGMv2_0186_CGC16
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0186
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0186_15 | HRGMv2_0186_15_29 | 39067 | 40407 | - | 2.A.66.1.32 |
| pfam | HRGMv2_0186_15 | HRGMv2_0186_15_30 | 40846 | 41556 | - | GYF_2 |
| CAZyme | HRGMv2_0186_15 | HRGMv2_0186_15_31 | 41560 | 42720 | - | PL10_1 |
| pfam | HRGMv2_0186_15 | HRGMv2_0186_15_32 | 42902 | 43612 | - | DNA_alkylation |
| CAZyme | HRGMv2_0186_15 | HRGMv2_0186_15_33 | 43977 | 45065 | - | GT4 |
| CAZyme | HRGMv2_0186_15 | HRGMv2_0186_15_34 | 45062 | 45973 | - | GT2 |
| CAZyme | HRGMv2_0186_15 | HRGMv2_0186_15_35 | 45970 | 46680 | - | GT2 |
| pfam | HRGMv2_0186_15 | HRGMv2_0186_15_36 | 46755 | 48878 | - | Reg_prop | PorZ_N_b_propeller |
| sulfatase | HRGMv2_0186_15 | HRGMv2_0186_15_37 | 49062 | 49661 | - | S1_7 |
| TC | HRGMv2_0186_15 | HRGMv2_0186_15_38 | 49700 | 50665 | - | 2.A.115.1.5 |
Gene ID: HRGMv2_0186_15_29
Type: TC
Location: 39067 - 40407 (-)
Type: TC
Location: 39067 - 40407 (-)
Gene ID: HRGMv2_0186_15_30
Type: pfam
Location: 40846 - 41556 (-)
Type: pfam
Location: 40846 - 41556 (-)
Gene ID: HRGMv2_0186_15_31
Type: CAZyme
Location: 41560 - 42720 (-)
Type: CAZyme
Location: 41560 - 42720 (-)
Gene ID: HRGMv2_0186_15_32
Type: pfam
Location: 42902 - 43612 (-)
Type: pfam
Location: 42902 - 43612 (-)
Gene ID: HRGMv2_0186_15_33
Type: CAZyme
Location: 43977 - 45065 (-)
Type: CAZyme
Location: 43977 - 45065 (-)
Gene ID: HRGMv2_0186_15_34
Type: CAZyme
Location: 45062 - 45973 (-)
Type: CAZyme
Location: 45062 - 45973 (-)
Gene ID: HRGMv2_0186_15_35
Type: CAZyme
Location: 45970 - 46680 (-)
Type: CAZyme
Location: 45970 - 46680 (-)
Gene ID: HRGMv2_0186_15_36
Type: pfam
Location: 46755 - 48878 (-)
Type: pfam
Location: 46755 - 48878 (-)
Gene ID: HRGMv2_0186_15_37
Type: sulfatase
Location: 49062 - 49661 (-)
Type: sulfatase
Location: 49062 - 49661 (-)
Gene ID: HRGMv2_0186_15_38
Type: TC
Location: 49700 - 50665 (-)
Type: TC
Location: 49700 - 50665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0186_15_29 | vegetarian > omnivore | 1.51545 | 0.04411 |
| HRGMv2_0186_15_29 | vegetarian > vegan | 1.21680 | 0.00565 |
| HRGMv2_0186_15_30 | vegetarian > omnivore | 1.58778 | 0.04342 |
| HRGMv2_0186_15_30 | vegetarian > vegan | 1.55055 | 0.00565 |
| HRGMv2_0186_15_31 | vegetarian > vegan | 1.60546 | 0.00565 |
| HRGMv2_0186_15_32 | vegetarian > vegan | 1.19808 | 0.00565 |
| HRGMv2_0186_15_33 | vegetarian > vegan | 3.83615 | 0.00565 |
| HRGMv2_0186_15_34 | vegetarian > omnivore | 2.02585 | 0.02734 |
| HRGMv2_0186_15_34 | vegetarian > vegan | 15.57290 | 0.00565 |