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Cluster: HRGMv2_0186_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_6 8469 10550 + GH127
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_7 10529 12289 + GH141
TC HRGMv2_0186_14 HRGMv2_0186_14_8 12360 13736 + 2.A.1.1.74
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_9 13720 15801 + GH78
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_10 15798 18440 + GH138
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_11 18456 22499 + CBM57 | CBM97 | GH137 | GH2
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_12 22824 25922 + GH2
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_13 25933 28743 + GH2
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_14 28743 31889 + GH106
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_15 31924 33333 + CE20
pfam HRGMv2_0186_14 HRGMv2_0186_14_16 34164 35729 + PDDEXK_9 | AAA-ATPase_like
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_17 35819 38182 + GH139
pfam HRGMv2_0186_14 HRGMv2_0186_14_18 38532 39704 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
NULL(UNKNOWN) HRGMv2_0186_14 HRGMv2_0186_14_19 39921 40136 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0186_14 HRGMv2_0186_14_20 40441 43269 - 1.B.42.1.8
pfam HRGMv2_0186_14 HRGMv2_0186_14_21 43993 45225 - 4HBT | Hydrolase_3
NULL(UNKNOWN) HRGMv2_0186_14 HRGMv2_0186_14_22 45287 45439 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0186_14 HRGMv2_0186_14_23 45535 48243 + CBM67 | GH78
Gene ID: HRGMv2_0186_14_6
Type: CAZyme
Location: 8469 - 10550 (+)
Gene ID: HRGMv2_0186_14_7
Type: CAZyme
Location: 10529 - 12289 (+)
Gene ID: HRGMv2_0186_14_8
Type: TC
Location: 12360 - 13736 (+)
Gene ID: HRGMv2_0186_14_9
Type: CAZyme
Location: 13720 - 15801 (+)
Gene ID: HRGMv2_0186_14_10
Type: CAZyme
Location: 15798 - 18440 (+)
Gene ID: HRGMv2_0186_14_11
Type: CAZyme
Location: 18456 - 22499 (+)
Gene ID: HRGMv2_0186_14_12
Type: CAZyme
Location: 22824 - 25922 (+)
Gene ID: HRGMv2_0186_14_13
Type: CAZyme
Location: 25933 - 28743 (+)
Gene ID: HRGMv2_0186_14_14
Type: CAZyme
Location: 28743 - 31889 (+)
Gene ID: HRGMv2_0186_14_15
Type: CAZyme
Location: 31924 - 33333 (+)
Gene ID: HRGMv2_0186_14_16
Type: pfam
Location: 34164 - 35729 (+)
Gene ID: HRGMv2_0186_14_17
Type: CAZyme
Location: 35819 - 38182 (+)
Gene ID: HRGMv2_0186_14_18
Type: pfam
Location: 38532 - 39704 (+)
Gene ID: HRGMv2_0186_14_19
Type:
Location: 39921 - 40136 (-)
Gene ID: HRGMv2_0186_14_20
Type: TC
Location: 40441 - 43269 (-)
Gene ID: HRGMv2_0186_14_21
Type: pfam
Location: 43993 - 45225 (-)
Gene ID: HRGMv2_0186_14_22
Type:
Location: 45287 - 45439 (-)
Gene ID: HRGMv2_0186_14_23
Type: CAZyme
Location: 45535 - 48243 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0186_14_23 vegetarian > vegan 1.42373 0.00565

🧭 Explore Read Mapping of CGC

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