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Cluster: HRGMv2_0186_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0186_13 HRGMv2_0186_13_10 16695 17348 + 1.C.113.1.3
pfam HRGMv2_0186_13 HRGMv2_0186_13_11 17573 19789 - Metallophos
CAZyme HRGMv2_0186_13 HRGMv2_0186_13_12 19786 22809 - GH92
pfam HRGMv2_0186_13 HRGMv2_0186_13_13 22827 24476 - SusD_RagB | SusD-like_3
TC HRGMv2_0186_13 HRGMv2_0186_13_14 24503 27532 - 1.B.14.6.1
CAZyme HRGMv2_0186_13 HRGMv2_0186_13_15 28160 30592 + GH31_4
STP HRGMv2_0186_13 HRGMv2_0186_13_16 31467 32357 - PfkB
TC HRGMv2_0186_13 HRGMv2_0186_13_17 32384 33541 - 2.A.1.7.17
CAZyme HRGMv2_0186_13 HRGMv2_0186_13_18 33660 35834 - GH36
CAZyme HRGMv2_0186_13 HRGMv2_0186_13_19 35847 37739 - GH32
Gene ID: HRGMv2_0186_13_10
Type: TC
Location: 16695 - 17348 (+)
Gene ID: HRGMv2_0186_13_11
Type: pfam
Location: 17573 - 19789 (-)
Gene ID: HRGMv2_0186_13_12
Type: CAZyme
Location: 19786 - 22809 (-)
Gene ID: HRGMv2_0186_13_13
Type: pfam
Location: 22827 - 24476 (-)
Gene ID: HRGMv2_0186_13_14
Type: TC
Location: 24503 - 27532 (-)
Gene ID: HRGMv2_0186_13_15
Type: CAZyme
Location: 28160 - 30592 (+)
Gene ID: HRGMv2_0186_13_16
Type: STP
Location: 31467 - 32357 (-)
Gene ID: HRGMv2_0186_13_17
Type: TC
Location: 32384 - 33541 (-)
Gene ID: HRGMv2_0186_13_18
Type: CAZyme
Location: 33660 - 35834 (-)
Gene ID: HRGMv2_0186_13_19
Type: CAZyme
Location: 35847 - 37739 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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