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Cluster: HRGMv2_0186_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0186_8 HRGMv2_0186_8_24 26889 28016 - 9.B.146.1.4
NULL(UNKNOWN) HRGMv2_0186_8 HRGMv2_0186_8_25 28128 28292 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0186_8 HRGMv2_0186_8_26 28321 29610 + Glug
TC HRGMv2_0186_8 HRGMv2_0186_8_27 29692 31800 + 2.A.7.3.49
NULL(UNKNOWN) HRGMv2_0186_8 HRGMv2_0186_8_28 31776 31973 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0186_8 HRGMv2_0186_8_29 32267 33661 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0186_8 HRGMv2_0186_8_30 33978 34808 - GT2
Gene ID: HRGMv2_0186_8_24
Type: TC
Location: 26889 - 28016 (-)
Gene ID: HRGMv2_0186_8_25
Type:
Location: 28128 - 28292 (-)
Gene ID: HRGMv2_0186_8_26
Type: pfam
Location: 28321 - 29610 (+)
Gene ID: HRGMv2_0186_8_27
Type: TC
Location: 29692 - 31800 (+)
Gene ID: HRGMv2_0186_8_28
Type:
Location: 31776 - 31973 (-)
Gene ID: HRGMv2_0186_8_29
Type:
Location: 32267 - 33661 (-)
Gene ID: HRGMv2_0186_8_30
Type: CAZyme
Location: 33978 - 34808 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0186_8_30 vegetarian > vegan 6.49669 0.00565

🧭 Explore Read Mapping of CGC

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