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Cluster: HRGMv2_0182_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0182_1 HRGMv2_0182_1_422 502049 505174 - 2.A.6.2.16
TC HRGMv2_0182_1 HRGMv2_0182_1_423 505323 506414 - 2.A.6.2.25
TC HRGMv2_0182_1 HRGMv2_0182_1_424 506435 507862 - 2.A.6.2.11
pfam HRGMv2_0182_1 HRGMv2_0182_1_425 507961 509154 - DUF4252
CAZyme HRGMv2_0182_1 HRGMv2_0182_1_426 509400 510620 + GT30
peptidase HRGMv2_0182_1 HRGMv2_0182_1_427 510609 511976 - S37.UNW
pfam HRGMv2_0182_1 HRGMv2_0182_1_428 512094 512558 + DUF2059
TC HRGMv2_0182_1 HRGMv2_0182_1_429 512682 514022 + 2.A.66.1.27
pfam HRGMv2_0182_1 HRGMv2_0182_1_430 514028 514831 - Ubie_methyltran | FtsJ | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_0182_1 HRGMv2_0182_1_431 514915 515532 - Hydrolase | Hydrolase_like | HAD_2
TC HRGMv2_0182_1 HRGMv2_0182_1_432 515559 517967 - 1.B.14.6.5
NULL(UNKNOWN) HRGMv2_0182_1 HRGMv2_0182_1_433 518582 519505 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0182_1 HRGMv2_0182_1_434 519530 520900 + 2.A.66.1.26
Gene ID: HRGMv2_0182_1_422
Type: TC
Location: 502049 - 505174 (-)
Gene ID: HRGMv2_0182_1_423
Type: TC
Location: 505323 - 506414 (-)
Gene ID: HRGMv2_0182_1_424
Type: TC
Location: 506435 - 507862 (-)
Gene ID: HRGMv2_0182_1_425
Type: pfam
Location: 507961 - 509154 (-)
Gene ID: HRGMv2_0182_1_426
Type: CAZyme
Location: 509400 - 510620 (+)
Gene ID: HRGMv2_0182_1_427
Type: peptidase
Location: 510609 - 511976 (-)
Gene ID: HRGMv2_0182_1_428
Type: pfam
Location: 512094 - 512558 (+)
Gene ID: HRGMv2_0182_1_429
Type: TC
Location: 512682 - 514022 (+)
Gene ID: HRGMv2_0182_1_430
Type: pfam
Location: 514028 - 514831 (-)
Gene ID: HRGMv2_0182_1_431
Type: pfam
Location: 514915 - 515532 (-)
Gene ID: HRGMv2_0182_1_432
Type: TC
Location: 515559 - 517967 (-)
Gene ID: HRGMv2_0182_1_433
Type:
Location: 518582 - 519505 (+)
Gene ID: HRGMv2_0182_1_434
Type: TC
Location: 519530 - 520900 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0182_1_430 vegetarian > vegan 1.17320 0.02177
HRGMv2_0182_1_433 vegetarian > vegan 1.32025 0.02177

🧭 Explore Read Mapping of CGC

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