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Cluster: HRGMv2_0182_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0182_10 HRGMv2_0182_10_3 2162 3226 - 8.A.59.2.1
TC HRGMv2_0182_10 HRGMv2_0182_10_4 3366 4586 - 3.A.1.122.2
TC HRGMv2_0182_10 HRGMv2_0182_10_5 4742 5485 - 3.A.1.122.14
pfam HRGMv2_0182_10 HRGMv2_0182_10_6 5507 6676 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_0182_10 HRGMv2_0182_10_7 6702 8033 - 2.A.6.2.26
CAZyme HRGMv2_0182_10 HRGMv2_0182_10_8 8630 10045 + GH109
TF HRGMv2_0182_10 HRGMv2_0182_10_9 10185 10760 + GerE
STP HRGMv2_0182_10 HRGMv2_0182_10_10 10817 11992 + FecR
TC HRGMv2_0182_10 HRGMv2_0182_10_11 12045 15392 + 1.B.14.6.1
Gene ID: HRGMv2_0182_10_3
Type: TC
Location: 2162 - 3226 (-)
Gene ID: HRGMv2_0182_10_4
Type: TC
Location: 3366 - 4586 (-)
Gene ID: HRGMv2_0182_10_5
Type: TC
Location: 4742 - 5485 (-)
Gene ID: HRGMv2_0182_10_6
Type: pfam
Location: 5507 - 6676 (-)
Gene ID: HRGMv2_0182_10_7
Type: TC
Location: 6702 - 8033 (-)
Gene ID: HRGMv2_0182_10_8
Type: CAZyme
Location: 8630 - 10045 (+)
Gene ID: HRGMv2_0182_10_9
Type: TF
Location: 10185 - 10760 (+)
Gene ID: HRGMv2_0182_10_10
Type: STP
Location: 10817 - 11992 (+)
Gene ID: HRGMv2_0182_10_11
Type: TC
Location: 12045 - 15392 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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