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Cluster: HRGMv2_0182_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0182_6 HRGMv2_0182_6_147 187695 188666 - 9.B.146.1.2
pfam HRGMv2_0182_6 HRGMv2_0182_6_148 188663 189565 - 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_149 190000 191082 - GT4
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_150 191151 192041 - GT2
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_151 192041 193183 - GT4
pfam HRGMv2_0182_6 HRGMv2_0182_6_152 193180 194691 - MurJ
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_153 194726 195538 - GT2
Gene ID: HRGMv2_0182_6_147
Type: TC
Location: 187695 - 188666 (-)
Gene ID: HRGMv2_0182_6_148
Type: pfam
Location: 188663 - 189565 (-)
Gene ID: HRGMv2_0182_6_149
Type: CAZyme
Location: 190000 - 191082 (-)
Gene ID: HRGMv2_0182_6_150
Type: CAZyme
Location: 191151 - 192041 (-)
Gene ID: HRGMv2_0182_6_151
Type: CAZyme
Location: 192041 - 193183 (-)
Gene ID: HRGMv2_0182_6_152
Type: pfam
Location: 193180 - 194691 (-)
Gene ID: HRGMv2_0182_6_153
Type: CAZyme
Location: 194726 - 195538 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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