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Cluster: HRGMv2_0182_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_127 161530 162456 - GT2
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_128 162619 163779 + GT2
pfam HRGMv2_0182_6 HRGMv2_0182_6_129 163814 165586 + Asn_synthase | GATase_7
TC HRGMv2_0182_6 HRGMv2_0182_6_130 165594 167018 + 2.A.66.2.6
pfam HRGMv2_0182_6 HRGMv2_0182_6_131 167028 168086 + Exo_endo_phos
CAZyme HRGMv2_0182_6 HRGMv2_0182_6_132 168097 169272 + GT2
pfam HRGMv2_0182_6 HRGMv2_0182_6_133 169276 170208 - 3Beta_HSD | Epimerase | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_0182_6 HRGMv2_0182_6_134 170314 171924 - 3.A.1.121.4
pfam HRGMv2_0182_6 HRGMv2_0182_6_135 171963 172817 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_0182_6 HRGMv2_0182_6_136 172889 174835 - 9.B.18.2.1
Gene ID: HRGMv2_0182_6_127
Type: CAZyme
Location: 161530 - 162456 (-)
Gene ID: HRGMv2_0182_6_128
Type: CAZyme
Location: 162619 - 163779 (+)
Gene ID: HRGMv2_0182_6_129
Type: pfam
Location: 163814 - 165586 (+)
Gene ID: HRGMv2_0182_6_130
Type: TC
Location: 165594 - 167018 (+)
Gene ID: HRGMv2_0182_6_131
Type: pfam
Location: 167028 - 168086 (+)
Gene ID: HRGMv2_0182_6_132
Type: CAZyme
Location: 168097 - 169272 (+)
Gene ID: HRGMv2_0182_6_133
Type: pfam
Location: 169276 - 170208 (-)
Gene ID: HRGMv2_0182_6_134
Type: TC
Location: 170314 - 171924 (-)
Gene ID: HRGMv2_0182_6_135
Type: pfam
Location: 171963 - 172817 (-)
Gene ID: HRGMv2_0182_6_136
Type: TC
Location: 172889 - 174835 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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