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Cluster: HRGMv2_0182_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0182_4 HRGMv2_0182_4_139 154305 155366 - 1.A.35.3.2
TC HRGMv2_0182_4 HRGMv2_0182_4_140 155406 156944 - 1.A.23.3.1
pfam HRGMv2_0182_4 HRGMv2_0182_4_141 157339 159183 + POR | POR_N | PFOR_II
pfam HRGMv2_0182_4 HRGMv2_0182_4_142 159186 160202 + TPP_enzyme_C
CAZyme HRGMv2_0182_4 HRGMv2_0182_4_143 160257 162629 - GH92
TC HRGMv2_0182_4 HRGMv2_0182_4_144 162747 164900 + 2.A.37.2.5
Gene ID: HRGMv2_0182_4_139
Type: TC
Location: 154305 - 155366 (-)
Gene ID: HRGMv2_0182_4_140
Type: TC
Location: 155406 - 156944 (-)
Gene ID: HRGMv2_0182_4_141
Type: pfam
Location: 157339 - 159183 (+)
Gene ID: HRGMv2_0182_4_142
Type: pfam
Location: 159186 - 160202 (+)
Gene ID: HRGMv2_0182_4_143
Type: CAZyme
Location: 160257 - 162629 (-)
Gene ID: HRGMv2_0182_4_144
Type: TC
Location: 162747 - 164900 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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