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Cluster: HRGMv2_0177_CGC96

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_109 HRGMv2_0177_109_37 38118 39083 + 9.B.1.1.5
peptidase HRGMv2_0177_109 HRGMv2_0177_109_38 39395 42292 + M16.019
pfam HRGMv2_0177_109 HRGMv2_0177_109_39 42481 42987 + DUF4251
TC HRGMv2_0177_109 HRGMv2_0177_109_40 43022 43654 - 1.A.62.2.1
pfam HRGMv2_0177_109 HRGMv2_0177_109_41 43740 44822 + Epimerase_2
CAZyme HRGMv2_0177_109 HRGMv2_0177_109_42 44814 45701 - GT2
TC HRGMv2_0177_109 HRGMv2_0177_109_43 45792 48392 + 1.B.14.6.14
Gene ID: HRGMv2_0177_109_37
Type: TC
Location: 38118 - 39083 (+)
Gene ID: HRGMv2_0177_109_38
Type: peptidase
Location: 39395 - 42292 (+)
Gene ID: HRGMv2_0177_109_39
Type: pfam
Location: 42481 - 42987 (+)
Gene ID: HRGMv2_0177_109_40
Type: TC
Location: 43022 - 43654 (-)
Gene ID: HRGMv2_0177_109_41
Type: pfam
Location: 43740 - 44822 (+)
Gene ID: HRGMv2_0177_109_42
Type: CAZyme
Location: 44814 - 45701 (-)
Gene ID: HRGMv2_0177_109_43
Type: TC
Location: 45792 - 48392 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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