Cluster: HRGMv2_0177_CGC93
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_01254
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_18 | 23873 | 26464 | - | GH3 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_19 | 26528 | 29089 | - | GH3 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_20 | 29106 | 30500 | - | GH30_2 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_21 | 30510 | 32789 | - | GH92 |
| pfam | HRGMv2_0177_107 | HRGMv2_0177_107_22 | 32933 | 33901 | - | BT_3987-like_N | BT_3044-like_C |
| pfam | HRGMv2_0177_107 | HRGMv2_0177_107_23 | 33930 | 35936 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0177_107 | HRGMv2_0177_107_24 | 35968 | 39084 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0177_107 | HRGMv2_0177_107_25 | 39108 | 40415 | - | NHL | TIG |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_26 | 40445 | 42553 | - | GH36 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_27 | 42890 | 47191 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0177_107 | HRGMv2_0177_107_28 | 47271 | 49055 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0177_107 | HRGMv2_0177_107_29 | 49563 | 53555 | + | HTH_AraC |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_30 | 53552 | 54559 | + | GH43_24 |
| pfam | HRGMv2_0177_107 | HRGMv2_0177_107_31 | 54593 | 56563 | + | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_32 | 56585 | 59515 | + | GH2 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_33 | 59534 | 60520 | + | GH43_2 |
| CAZyme | HRGMv2_0177_107 | HRGMv2_0177_107_34 | 60583 | 61563 | + | GH43_2 |
Gene ID: HRGMv2_0177_107_18
Type: CAZyme
Location: 23873 - 26464 (-)
Type: CAZyme
Location: 23873 - 26464 (-)
Gene ID: HRGMv2_0177_107_19
Type: CAZyme
Location: 26528 - 29089 (-)
Type: CAZyme
Location: 26528 - 29089 (-)
Gene ID: HRGMv2_0177_107_20
Type: CAZyme
Location: 29106 - 30500 (-)
Type: CAZyme
Location: 29106 - 30500 (-)
Gene ID: HRGMv2_0177_107_21
Type: CAZyme
Location: 30510 - 32789 (-)
Type: CAZyme
Location: 30510 - 32789 (-)
Gene ID: HRGMv2_0177_107_22
Type: pfam
Location: 32933 - 33901 (-)
Type: pfam
Location: 32933 - 33901 (-)
Gene ID: HRGMv2_0177_107_23
Type: pfam
Location: 33930 - 35936 (-)
Type: pfam
Location: 33930 - 35936 (-)
Gene ID: HRGMv2_0177_107_24
Type: TC
Location: 35968 - 39084 (-)
Type: TC
Location: 35968 - 39084 (-)
Gene ID: HRGMv2_0177_107_25
Type: pfam
Location: 39108 - 40415 (-)
Type: pfam
Location: 39108 - 40415 (-)
Gene ID: HRGMv2_0177_107_26
Type: CAZyme
Location: 40445 - 42553 (-)
Type: CAZyme
Location: 40445 - 42553 (-)
Gene ID: HRGMv2_0177_107_27
Type: CAZyme
Location: 42890 - 47191 (-)
Type: CAZyme
Location: 42890 - 47191 (-)
Gene ID: HRGMv2_0177_107_28
Type:
Location: 47271 - 49055 (-)
Type:
Location: 47271 - 49055 (-)
Gene ID: HRGMv2_0177_107_29
Type: TF
Location: 49563 - 53555 (+)
Type: TF
Location: 49563 - 53555 (+)
Gene ID: HRGMv2_0177_107_30
Type: CAZyme
Location: 53552 - 54559 (+)
Type: CAZyme
Location: 53552 - 54559 (+)
Gene ID: HRGMv2_0177_107_31
Type: pfam
Location: 54593 - 56563 (+)
Type: pfam
Location: 54593 - 56563 (+)
Gene ID: HRGMv2_0177_107_32
Type: CAZyme
Location: 56585 - 59515 (+)
Type: CAZyme
Location: 56585 - 59515 (+)
Gene ID: HRGMv2_0177_107_33
Type: CAZyme
Location: 59534 - 60520 (+)
Type: CAZyme
Location: 59534 - 60520 (+)
Gene ID: HRGMv2_0177_107_34
Type: CAZyme
Location: 60583 - 61563 (+)
Type: CAZyme
Location: 60583 - 61563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.