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Cluster: HRGMv2_0177_CGC90

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_105 HRGMv2_0177_105_12 12706 13779 + GT4
pfam HRGMv2_0177_105 HRGMv2_0177_105_13 13776 15008 + Glycos_transf_1 | Glyco_trans_1_4
TC HRGMv2_0177_105 HRGMv2_0177_105_14 15013 16068 + 9.B.18.2.1
pfam HRGMv2_0177_105 HRGMv2_0177_105_15 16179 17327 + Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C
pfam HRGMv2_0177_105 HRGMv2_0177_105_16 17335 18519 + Epimerase_2
CAZyme HRGMv2_0177_105 HRGMv2_0177_105_17 18523 19728 + GT4
TC HRGMv2_0177_105 HRGMv2_0177_105_18 19738 20346 + 9.B.18.1.3
Gene ID: HRGMv2_0177_105_12
Type: CAZyme
Location: 12706 - 13779 (+)
Gene ID: HRGMv2_0177_105_13
Type: pfam
Location: 13776 - 15008 (+)
Gene ID: HRGMv2_0177_105_14
Type: TC
Location: 15013 - 16068 (+)
Gene ID: HRGMv2_0177_105_15
Type: pfam
Location: 16179 - 17327 (+)
Gene ID: HRGMv2_0177_105_16
Type: pfam
Location: 17335 - 18519 (+)
Gene ID: HRGMv2_0177_105_17
Type: CAZyme
Location: 18523 - 19728 (+)
Gene ID: HRGMv2_0177_105_18
Type: TC
Location: 19738 - 20346 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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