Cluster: HRGMv2_0177_CGC89
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_02948
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0177_101 | HRGMv2_0177_101_60 | 86575 | 88146 | + | 3.D.10.1.4 |
| CAZyme | HRGMv2_0177_101 | HRGMv2_0177_101_61 | 88691 | 90973 | - | GH89 |
| NULL(UNKNOWN) | HRGMv2_0177_101 | HRGMv2_0177_101_62 | 91120 | 91986 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_101 | HRGMv2_0177_101_63 | 92027 | 93262 | - | GH88 |
| pfam | HRGMv2_0177_101 | HRGMv2_0177_101_64 | 93393 | 94499 | - | Alginate_lyase |
| NULL(UNKNOWN) | HRGMv2_0177_101 | HRGMv2_0177_101_65 | 94863 | 95801 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_101 | HRGMv2_0177_101_66 | 95798 | 98185 | + | PL30 |
| NULL(UNKNOWN) | HRGMv2_0177_101 | HRGMv2_0177_101_67 | 98335 | 98496 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_101 | HRGMv2_0177_101_68 | 98514 | 100331 | + | GH35 |
| TC | HRGMv2_0177_101 | HRGMv2_0177_101_69 | 100550 | 103636 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0177_101 | HRGMv2_0177_101_70 | 103682 | 105346 | + | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0177_101 | HRGMv2_0177_101_71 | 105374 | 108361 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0177_101_60
Type: TC
Location: 86575 - 88146 (+)
Type: TC
Location: 86575 - 88146 (+)
Gene ID: HRGMv2_0177_101_61
Type: CAZyme
Location: 88691 - 90973 (-)
Type: CAZyme
Location: 88691 - 90973 (-)
Gene ID: HRGMv2_0177_101_62
Type:
Location: 91120 - 91986 (-)
Type:
Location: 91120 - 91986 (-)
Gene ID: HRGMv2_0177_101_63
Type: CAZyme
Location: 92027 - 93262 (-)
Type: CAZyme
Location: 92027 - 93262 (-)
Gene ID: HRGMv2_0177_101_64
Type: pfam
Location: 93393 - 94499 (-)
Type: pfam
Location: 93393 - 94499 (-)
Gene ID: HRGMv2_0177_101_65
Type:
Location: 94863 - 95801 (+)
Type:
Location: 94863 - 95801 (+)
Gene ID: HRGMv2_0177_101_66
Type: CAZyme
Location: 95798 - 98185 (+)
Type: CAZyme
Location: 95798 - 98185 (+)
Gene ID: HRGMv2_0177_101_67
Type:
Location: 98335 - 98496 (-)
Type:
Location: 98335 - 98496 (-)
Gene ID: HRGMv2_0177_101_68
Type: CAZyme
Location: 98514 - 100331 (+)
Type: CAZyme
Location: 98514 - 100331 (+)
Gene ID: HRGMv2_0177_101_69
Type: TC
Location: 100550 - 103636 (+)
Type: TC
Location: 100550 - 103636 (+)
Gene ID: HRGMv2_0177_101_70
Type: pfam
Location: 103682 - 105346 (+)
Type: pfam
Location: 103682 - 105346 (+)
Gene ID: HRGMv2_0177_101_71
Type: TC
Location: 105374 - 108361 (+)
Type: TC
Location: 105374 - 108361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.