dbCAN HGM

Cluster: HRGMv2_0177_CGC85

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_55	69147	69971	+	GT5
pfam	HRGMv2_0177_100	HRGMv2_0177_100_56	69996	71585	+	DUF4270
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_57	71865	73265	-	GH57
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_58	73281	74549	-	GT4
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_59	74564	76504	-	GH133
TC	HRGMv2_0177_100	HRGMv2_0177_100_60	76768	77313	+	9.B.104.3.2
TF	HRGMv2_0177_100	HRGMv2_0177_100_61	77322	81617	-	HTH_AraC
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_62	81944	85660	-	CE8
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_63	85693	87645	-	CE12
pfam	HRGMv2_0177_100	HRGMv2_0177_100_64	87865	89748	-	GxGYxYP_C
CAZyme	HRGMv2_0177_100	HRGMv2_0177_100_65	89763	92297	-	GH51_2

Gene ID: HRGMv2_0177_100_55
Type: CAZyme
Location: 69147 - 69971 (+)

Gene ID: HRGMv2_0177_100_56
Type: pfam
Location: 69996 - 71585 (+)

Gene ID: HRGMv2_0177_100_57
Type: CAZyme
Location: 71865 - 73265 (-)

Gene ID: HRGMv2_0177_100_58
Type: CAZyme
Location: 73281 - 74549 (-)

Gene ID: HRGMv2_0177_100_59
Type: CAZyme
Location: 74564 - 76504 (-)

Gene ID: HRGMv2_0177_100_60
Type: TC
Location: 76768 - 77313 (+)

Gene ID: HRGMv2_0177_100_61
Type: TF
Location: 77322 - 81617 (-)

Gene ID: HRGMv2_0177_100_62
Type: CAZyme
Location: 81944 - 85660 (-)

Gene ID: HRGMv2_0177_100_63
Type: CAZyme
Location: 85693 - 87645 (-)

Gene ID: HRGMv2_0177_100_64
Type: pfam
Location: 87865 - 89748 (-)

Gene ID: HRGMv2_0177_100_65
Type: CAZyme
Location: 89763 - 92297 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.