Cluster: HRGMv2_0177_CGC82
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_05307
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0177_99 | HRGMv2_0177_99_6 | 3578 | 4933 | + | 2.A.66.1.28 |
| NULL(UNKNOWN) | HRGMv2_0177_99 | HRGMv2_0177_99_7 | 5210 | 5449 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_99 | HRGMv2_0177_99_8 | 5587 | 8112 | - | GH3 |
| TC | HRGMv2_0177_99 | HRGMv2_0177_99_9 | 8193 | 9095 | - | 1.A.23.2.1 |
| TC | HRGMv2_0177_99 | HRGMv2_0177_99_10 | 9328 | 11601 | + | 1.B.14.14.1 |
| TC | HRGMv2_0177_99 | HRGMv2_0177_99_11 | 11619 | 12185 | + | 4.B.1.1.4 |
Gene ID: HRGMv2_0177_99_6
Type: TC
Location: 3578 - 4933 (+)
Type: TC
Location: 3578 - 4933 (+)
Gene ID: HRGMv2_0177_99_7
Type:
Location: 5210 - 5449 (+)
Type:
Location: 5210 - 5449 (+)
Gene ID: HRGMv2_0177_99_8
Type: CAZyme
Location: 5587 - 8112 (-)
Type: CAZyme
Location: 5587 - 8112 (-)
Gene ID: HRGMv2_0177_99_9
Type: TC
Location: 8193 - 9095 (-)
Type: TC
Location: 8193 - 9095 (-)
Gene ID: HRGMv2_0177_99_10
Type: TC
Location: 9328 - 11601 (+)
Type: TC
Location: 9328 - 11601 (+)
Gene ID: HRGMv2_0177_99_11
Type: TC
Location: 11619 - 12185 (+)
Type: TC
Location: 11619 - 12185 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0177_99_6 | vegan > omnivore | 1.24119 | 0.04328 |