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Cluster: HRGMv2_0177_CGC80

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_98 HRGMv2_0177_98_9 6803 7531 + GT32
CAZyme HRGMv2_0177_98 HRGMv2_0177_98_10 7542 8504 + GT2
NULL(UNKNOWN) HRGMv2_0177_98 HRGMv2_0177_98_11 8567 9850 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_98 HRGMv2_0177_98_12 9878 10900 + GT4
CAZyme HRGMv2_0177_98 HRGMv2_0177_98_13 11802 13025 + GT4
CAZyme HRGMv2_0177_98 HRGMv2_0177_98_14 13057 13821 + GT2
pfam HRGMv2_0177_98 HRGMv2_0177_98_15 13818 14840 + 3Beta_HSD | Epimerase
TC HRGMv2_0177_98 HRGMv2_0177_98_16 14899 15849 + 9.B.146.1.7
Gene ID: HRGMv2_0177_98_9
Type: CAZyme
Location: 6803 - 7531 (+)
Gene ID: HRGMv2_0177_98_10
Type: CAZyme
Location: 7542 - 8504 (+)
Gene ID: HRGMv2_0177_98_11
Type:
Location: 8567 - 9850 (+)
Gene ID: HRGMv2_0177_98_12
Type: CAZyme
Location: 9878 - 10900 (+)
Gene ID: HRGMv2_0177_98_13
Type: CAZyme
Location: 11802 - 13025 (+)
Gene ID: HRGMv2_0177_98_14
Type: CAZyme
Location: 13057 - 13821 (+)
Gene ID: HRGMv2_0177_98_15
Type: pfam
Location: 13818 - 14840 (+)
Gene ID: HRGMv2_0177_98_16
Type: TC
Location: 14899 - 15849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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