dbCAN Logo

Cluster: HRGMv2_0177_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_17 HRGMv2_0177_17_1 511 2487 - 9.B.18.2.1
pfam HRGMv2_0177_17 HRGMv2_0177_17_2 2554 2946 - DDE_Tnp_IS66
pfam HRGMv2_0177_17 HRGMv2_0177_17_3 3434 4774 - Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
TC HRGMv2_0177_17 HRGMv2_0177_17_4 4819 5472 - 9.B.18.1.1
NULL(UNKNOWN) HRGMv2_0177_17 HRGMv2_0177_17_5 5482 6078 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0177_17 HRGMv2_0177_17_6 6080 6367 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_17 HRGMv2_0177_17_7 6768 7904 - GT4
CAZyme HRGMv2_0177_17 HRGMv2_0177_17_8 7924 8901 - GT2
Gene ID: HRGMv2_0177_17_1
Type: TC
Location: 511 - 2487 (-)
Gene ID: HRGMv2_0177_17_2
Type: pfam
Location: 2554 - 2946 (-)
Gene ID: HRGMv2_0177_17_3
Type: pfam
Location: 3434 - 4774 (-)
Gene ID: HRGMv2_0177_17_4
Type: TC
Location: 4819 - 5472 (-)
Gene ID: HRGMv2_0177_17_5
Type:
Location: 5482 - 6078 (-)
Gene ID: HRGMv2_0177_17_6
Type:
Location: 6080 - 6367 (-)
Gene ID: HRGMv2_0177_17_7
Type: CAZyme
Location: 6768 - 7904 (-)
Gene ID: HRGMv2_0177_17_8
Type: CAZyme
Location: 7924 - 8901 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List