dbCAN Logo

Cluster: HRGMv2_0177_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_90 HRGMv2_0177_90_5 4840 5904 - 8.A.1.1.2
TF HRGMv2_0177_90 HRGMv2_0177_90_6 5908 6348 - MarR
CAZyme HRGMv2_0177_90 HRGMv2_0177_90_7 6685 8535 - GH13_46
TC HRGMv2_0177_90 HRGMv2_0177_90_8 8743 9903 - 3.B.1.1.2
TC HRGMv2_0177_90 HRGMv2_0177_90_9 9906 10349 - 3.B.1.1.2
pfam HRGMv2_0177_90 HRGMv2_0177_90_10 10375 11289 - LTD | OAD_gamma
TC HRGMv2_0177_90 HRGMv2_0177_90_11 11310 12863 - 3.B.1.1.2
STP HRGMv2_0177_90 HRGMv2_0177_90_12 12989 13393 - Glyoxalase
TC HRGMv2_0177_90 HRGMv2_0177_90_13 13498 15903 - 1.B.14.6.7
Gene ID: HRGMv2_0177_90_5
Type: TC
Location: 4840 - 5904 (-)
Gene ID: HRGMv2_0177_90_6
Type: TF
Location: 5908 - 6348 (-)
Gene ID: HRGMv2_0177_90_7
Type: CAZyme
Location: 6685 - 8535 (-)
Gene ID: HRGMv2_0177_90_8
Type: TC
Location: 8743 - 9903 (-)
Gene ID: HRGMv2_0177_90_9
Type: TC
Location: 9906 - 10349 (-)
Gene ID: HRGMv2_0177_90_10
Type: pfam
Location: 10375 - 11289 (-)
Gene ID: HRGMv2_0177_90_11
Type: TC
Location: 11310 - 12863 (-)
Gene ID: HRGMv2_0177_90_12
Type: STP
Location: 12989 - 13393 (-)
Gene ID: HRGMv2_0177_90_13
Type: TC
Location: 13498 - 15903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List