Cluster: HRGMv2_0177_CGC78
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_07386
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_8 | 10089 | 13952 | + | GH31_18 |
| TF | HRGMv2_0177_89 | HRGMv2_0177_89_9 | 14052 | 14594 | - | GerE |
| STP | HRGMv2_0177_89 | HRGMv2_0177_89_10 | 14718 | 15737 | + | FecR |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_11 | 15840 | 18173 | + | CBM32 |
| pfam | HRGMv2_0177_89 | HRGMv2_0177_89_12 | 18199 | 19368 | + | F5_F8_type_C | Big_2 |
| TC | HRGMv2_0177_89 | HRGMv2_0177_89_13 | 19528 | 22905 | + | 1.B.14.6.1 |
| TC | HRGMv2_0177_89 | HRGMv2_0177_89_14 | 22920 | 24764 | + | 8.A.46.1.5 |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_15 | 24908 | 29365 | + | PL8_3 |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_16 | 29449 | 30798 | + | GH105 |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_17 | 31169 | 32263 | + | GH105 |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_18 | 32279 | 34396 | + | GH2 |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_19 | 34451 | 35992 | + | GH109 |
| pfam | HRGMv2_0177_89 | HRGMv2_0177_89_20 | 36292 | 36756 | - | LMWPc |
| CAZyme | HRGMv2_0177_89 | HRGMv2_0177_89_21 | 36790 | 38640 | - | GH123 |
| TC | HRGMv2_0177_89 | HRGMv2_0177_89_22 | 38624 | 41080 | - | 3.A.11.3.1 |
| pfam | HRGMv2_0177_89 | HRGMv2_0177_89_23 | 41323 | 41907 | - | OMP_b-brl | OMP_b-brl_2 |
| pfam | HRGMv2_0177_89 | HRGMv2_0177_89_24 | 41982 | 43094 | - | GldN |
| TC | HRGMv2_0177_89 | HRGMv2_0177_89_25 | 43122 | 44618 | - | 9.A.25.1.1 |
| pfam | HRGMv2_0177_89 | HRGMv2_0177_89_26 | 44631 | 45407 | - | GldL_N |
| TC | HRGMv2_0177_89 | HRGMv2_0177_89_27 | 45410 | 46846 | - | 9.A.25.1.1 |
Gene ID: HRGMv2_0177_89_8
Type: CAZyme
Location: 10089 - 13952 (+)
Type: CAZyme
Location: 10089 - 13952 (+)
Gene ID: HRGMv2_0177_89_9
Type: TF
Location: 14052 - 14594 (-)
Type: TF
Location: 14052 - 14594 (-)
Gene ID: HRGMv2_0177_89_10
Type: STP
Location: 14718 - 15737 (+)
Type: STP
Location: 14718 - 15737 (+)
Gene ID: HRGMv2_0177_89_11
Type: CAZyme
Location: 15840 - 18173 (+)
Type: CAZyme
Location: 15840 - 18173 (+)
Gene ID: HRGMv2_0177_89_12
Type: pfam
Location: 18199 - 19368 (+)
Type: pfam
Location: 18199 - 19368 (+)
Gene ID: HRGMv2_0177_89_13
Type: TC
Location: 19528 - 22905 (+)
Type: TC
Location: 19528 - 22905 (+)
Gene ID: HRGMv2_0177_89_14
Type: TC
Location: 22920 - 24764 (+)
Type: TC
Location: 22920 - 24764 (+)
Gene ID: HRGMv2_0177_89_15
Type: CAZyme
Location: 24908 - 29365 (+)
Type: CAZyme
Location: 24908 - 29365 (+)
Gene ID: HRGMv2_0177_89_16
Type: CAZyme
Location: 29449 - 30798 (+)
Type: CAZyme
Location: 29449 - 30798 (+)
Gene ID: HRGMv2_0177_89_17
Type: CAZyme
Location: 31169 - 32263 (+)
Type: CAZyme
Location: 31169 - 32263 (+)
Gene ID: HRGMv2_0177_89_18
Type: CAZyme
Location: 32279 - 34396 (+)
Type: CAZyme
Location: 32279 - 34396 (+)
Gene ID: HRGMv2_0177_89_19
Type: CAZyme
Location: 34451 - 35992 (+)
Type: CAZyme
Location: 34451 - 35992 (+)
Gene ID: HRGMv2_0177_89_20
Type: pfam
Location: 36292 - 36756 (-)
Type: pfam
Location: 36292 - 36756 (-)
Gene ID: HRGMv2_0177_89_21
Type: CAZyme
Location: 36790 - 38640 (-)
Type: CAZyme
Location: 36790 - 38640 (-)
Gene ID: HRGMv2_0177_89_22
Type: TC
Location: 38624 - 41080 (-)
Type: TC
Location: 38624 - 41080 (-)
Gene ID: HRGMv2_0177_89_23
Type: pfam
Location: 41323 - 41907 (-)
Type: pfam
Location: 41323 - 41907 (-)
Gene ID: HRGMv2_0177_89_24
Type: pfam
Location: 41982 - 43094 (-)
Type: pfam
Location: 41982 - 43094 (-)
Gene ID: HRGMv2_0177_89_25
Type: TC
Location: 43122 - 44618 (-)
Type: TC
Location: 43122 - 44618 (-)
Gene ID: HRGMv2_0177_89_26
Type: pfam
Location: 44631 - 45407 (-)
Type: pfam
Location: 44631 - 45407 (-)
Gene ID: HRGMv2_0177_89_27
Type: TC
Location: 45410 - 46846 (-)
Type: TC
Location: 45410 - 46846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.