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Cluster: HRGMv2_0177_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_80 HRGMv2_0177_80_25 32107 34785 + CBM67 | GH78
CAZyme HRGMv2_0177_80 HRGMv2_0177_80_26 34802 36520 + GH78
CAZyme HRGMv2_0177_80 HRGMv2_0177_80_27 36555 38849 + CBM67 | GH78
TC HRGMv2_0177_80 HRGMv2_0177_80_28 39997 43194 + 1.B.14.6.1
pfam HRGMv2_0177_80 HRGMv2_0177_80_29 43203 45146 + SusD_RagB | SusD-like_3
pfam HRGMv2_0177_80 HRGMv2_0177_80_30 45167 46408 + DUF4959 | DUF5000 | DUF5126 | F5_F8_type_C_2
CAZyme HRGMv2_0177_80 HRGMv2_0177_80_31 46468 47562 + CBM32
CAZyme HRGMv2_0177_80 HRGMv2_0177_80_32 47642 50158 + PL8_3
Gene ID: HRGMv2_0177_80_25
Type: CAZyme
Location: 32107 - 34785 (+)
Gene ID: HRGMv2_0177_80_26
Type: CAZyme
Location: 34802 - 36520 (+)
Gene ID: HRGMv2_0177_80_27
Type: CAZyme
Location: 36555 - 38849 (+)
Gene ID: HRGMv2_0177_80_28
Type: TC
Location: 39997 - 43194 (+)
Gene ID: HRGMv2_0177_80_29
Type: pfam
Location: 43203 - 45146 (+)
Gene ID: HRGMv2_0177_80_30
Type: pfam
Location: 45167 - 46408 (+)
Gene ID: HRGMv2_0177_80_31
Type: CAZyme
Location: 46468 - 47562 (+)
Gene ID: HRGMv2_0177_80_32
Type: CAZyme
Location: 47642 - 50158 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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