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Cluster: HRGMv2_0177_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_72 HRGMv2_0177_72_9 13156 15405 - GH20
CAZyme HRGMv2_0177_72 HRGMv2_0177_72_10 15613 18192 - GH3
CAZyme HRGMv2_0177_72 HRGMv2_0177_72_11 18173 20560 - PL30
CAZyme HRGMv2_0177_72 HRGMv2_0177_72_12 20571 22847 - GH95
NULL(UNKNOWN) HRGMv2_0177_72 HRGMv2_0177_72_13 22961 23107 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_72 HRGMv2_0177_72_14 23217 28460 - PL8_2
TC HRGMv2_0177_72 HRGMv2_0177_72_15 28570 30084 - 8.A.46.1.3
TC HRGMv2_0177_72 HRGMv2_0177_72_16 30106 33144 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0177_72 HRGMv2_0177_72_17 33162 34928 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0177_72 HRGMv2_0177_72_18 35530 39576 - HTH_AraC
TC HRGMv2_0177_72 HRGMv2_0177_72_19 39666 40994 - 2.A.1.7.1
Gene ID: HRGMv2_0177_72_9
Type: CAZyme
Location: 13156 - 15405 (-)
Gene ID: HRGMv2_0177_72_10
Type: CAZyme
Location: 15613 - 18192 (-)
Gene ID: HRGMv2_0177_72_11
Type: CAZyme
Location: 18173 - 20560 (-)
Gene ID: HRGMv2_0177_72_12
Type: CAZyme
Location: 20571 - 22847 (-)
Gene ID: HRGMv2_0177_72_13
Type:
Location: 22961 - 23107 (-)
Gene ID: HRGMv2_0177_72_14
Type: CAZyme
Location: 23217 - 28460 (-)
Gene ID: HRGMv2_0177_72_15
Type: TC
Location: 28570 - 30084 (-)
Gene ID: HRGMv2_0177_72_16
Type: TC
Location: 30106 - 33144 (-)
Gene ID: HRGMv2_0177_72_17
Type:
Location: 33162 - 34928 (-)
Gene ID: HRGMv2_0177_72_18
Type: TF
Location: 35530 - 39576 (-)
Gene ID: HRGMv2_0177_72_19
Type: TC
Location: 39666 - 40994 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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