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Cluster: HRGMv2_0177_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_15 HRGMv2_0177_15_9 7870 8718 - CE1
NULL(UNKNOWN) HRGMv2_0177_15 HRGMv2_0177_15_10 8766 10379 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_15 HRGMv2_0177_15_11 10428 12746 - GH74
CAZyme HRGMv2_0177_15 HRGMv2_0177_15_12 12789 15962 - PL8_2
TC HRGMv2_0177_15 HRGMv2_0177_15_13 16006 17499 - 8.A.46.1.3
TC HRGMv2_0177_15 HRGMv2_0177_15_14 17511 20513 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0177_15 HRGMv2_0177_15_15 20818 22494 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0177_15 HRGMv2_0177_15_16 22693 26733 - HTH_AraC
TC HRGMv2_0177_15 HRGMv2_0177_15_17 27049 28227 + 2.A.1.2.97
TC HRGMv2_0177_15 HRGMv2_0177_15_18 28290 30536 - 2.A.37.1.5
sulfatase HRGMv2_0177_15 HRGMv2_0177_15_19 31061 32572 + S1_37
pfam HRGMv2_0177_15 HRGMv2_0177_15_20 32659 33186 + Biotin_lipoyl | Biotin_lipoyl_2
TC HRGMv2_0177_15 HRGMv2_0177_15_21 33170 34705 + 3.B.1.1.2
Gene ID: HRGMv2_0177_15_9
Type: CAZyme
Location: 7870 - 8718 (-)
Gene ID: HRGMv2_0177_15_10
Type:
Location: 8766 - 10379 (-)
Gene ID: HRGMv2_0177_15_11
Type: CAZyme
Location: 10428 - 12746 (-)
Gene ID: HRGMv2_0177_15_12
Type: CAZyme
Location: 12789 - 15962 (-)
Gene ID: HRGMv2_0177_15_13
Type: TC
Location: 16006 - 17499 (-)
Gene ID: HRGMv2_0177_15_14
Type: TC
Location: 17511 - 20513 (-)
Gene ID: HRGMv2_0177_15_15
Type:
Location: 20818 - 22494 (-)
Gene ID: HRGMv2_0177_15_16
Type: TF
Location: 22693 - 26733 (-)
Gene ID: HRGMv2_0177_15_17
Type: TC
Location: 27049 - 28227 (+)
Gene ID: HRGMv2_0177_15_18
Type: TC
Location: 28290 - 30536 (-)
Gene ID: HRGMv2_0177_15_19
Type: sulfatase
Location: 31061 - 32572 (+)
Gene ID: HRGMv2_0177_15_20
Type: pfam
Location: 32659 - 33186 (+)
Gene ID: HRGMv2_0177_15_21
Type: TC
Location: 33170 - 34705 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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